Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Comp ENSRNOG00000048472

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Description

cartilage oligomeric matrix protein [Source:RGD Symbol;Acc:2378]

Location

Primary_assembly 16: 19,081,172-19,089,605 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 2 transcripts (splice variants), 197 orthologues, 5 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120265.2	Comp-202	2683	781aa	ENSRNOP00000095935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AP06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000072536.4	Comp-201	2412	755aa	ENSRNOP00000067037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KA56 M0RBU0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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