Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
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Gene: Vrtn ENSRNOG00000048378

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Description

vertebrae development associated [Source:RGD Symbol;Acc:1587174]

Gene Synonyms

LOC679509

Location

Primary_assembly 6: 110,017,557-110,028,759 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 6 transcripts (splice variants), 181 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000173372.1	Vrtn-206	3555	754aa	ENSRNOP00000104701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000132238.1	Vrtn-202	3478	754aa	ENSRNOP00000110163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8	-
ENSRNOT00000149161.1	Vrtn-204	3472	754aa	ENSRNOP00000109231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8	-
ENSRNOT00000133627.1	Vrtn-203	3452	754aa	ENSRNOP00000100698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8	-
ENSRNOT00000150853.1	Vrtn-205	3410	754aa	ENSRNOP00000104048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8	-
ENSRNOT00000073962.4	Vrtn-201	3081	754aa	ENSRNOP00000067390.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDX8 M0RCR3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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