Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC100360856 ENSRNOG00000047581

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Description

hypothetical protein LOC100360856 [Source:RGD Symbol;Acc:2321302]

Gene Synonyms

AABR07066700.1, LOC100360963, LOC100361155, LOC363433, LOC501089, LOC690576, LOC691633

Location

Primary_assembly 9: 2,849,456-2,916,360 reverse strand.

mRatBN7.2:CM026982.1

About this gene

This gene has 6 transcripts (splice variants), 101 orthologues and 72 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101947.1	LOC100360856-206	3221	251aa	ENSRNOP00000084428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095705.1	LOC100360856-205	3001	239aa	ENSRNOP00000086580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2H0	-
ENSRNOT00000079703.2	LOC100360856-204	2267	113aa	ENSRNOP00000074663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8M4	-
ENSRNOT00000072533.2	LOC100360856-202	1508	215aa	ENSRNOP00000065132.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R6S6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000075578.3	LOC100360856-203	1457	203aa	ENSRNOP00000067276.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RCF8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000050485.7	LOC100360856-201	1443	203aa	ENSRNOP00000039060.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LWG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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