Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Srek1ip1 ENSRNOG00000047506

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Description

SREK1-interacting protein 1 [Source:RGD Symbol;Acc:1305356]

Gene Synonyms

LOC100362980, LOC361888, MGC105985, RGD1305356, Sfrs12ip1, p18SRP

Location

Primary_assembly 2: 37,709,768-37,733,383 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 185 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074499.4	Srek1ip1-201	2500	155aa	ENSRNOP00000064069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R3Z4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000095129.2	Srek1ip1-202	2417	145aa	ENSRNOP00000095882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B3G8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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