Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Smg1 ENSRNOG00000047386

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Description

SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:RGD Symbol;Acc:1563508]

Gene Synonyms

LOC499250, LOC691397, RGD1563508

Location

Primary_assembly 1: 181,876,134-181,977,894 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 232 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000092467.3	Smg1-202	15513	3658aa	ENSRNOP00000092355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GK52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000089399.3	Smg1-201	15307	3634aa	ENSRNOP00000078916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMC8	-

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Summary

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