Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Caprin2 ENSRNOG00000047319

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Description

caprin family member 2 [Source:RGD Symbol;Acc:1593683]

Gene Synonyms

Adir, LOC686779, Rng140

Location

Primary_assembly 4: 183,537,430-183,592,809 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 7 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000159367.1	Caprin2-206	3903	1119aa	ENSRNOP00000109644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000130293.1	Caprin2-205	4125	1028aa	ENSRNOP00000099753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173464.1	Caprin2-207	3693	1049aa	ENSRNOP00000105840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000073927.5	Caprin2-202	3570	1008aa	ENSRNOP00000064956.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R6B1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000097069.2	Caprin2-204	3521	995aa	ENSRNOP00000084248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0V8	-
ENSRNOT00000070907.4	Caprin2-201	3386	950aa	ENSRNOP00000065469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R7N7	-
ENSRNOT00000074740.5	Caprin2-203	2966	810aa	ENSRNOP00000064535.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R577	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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