Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sgce ENSRNOG00000046905

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Description

sarcoglycan, epsilon [Source:RGD Symbol;Acc:1303201]

Location

Primary_assembly 4: 33,737,814-33,808,908 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues, 1 paralogue and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074177.4	Sgce-201	1828	464aa	ENSRNOP00000064432.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R4Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000108812.2	Sgce-204	1916	460aa	ENSRNOP00000089367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA37	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000100248.2	Sgce-202	1889	451aa	ENSRNOP00000091800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGU2	-
ENSRNOT00000103566.2	Sgce-203	1585	396aa	ENSRNOP00000094451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKU0	-
ENSRNOT00000119838.2	Sgce-205	1374	443aa	ENSRNOP00000085107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GCG9	-

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Summary

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