Gene: Prdm16 ENSRNOG00000045913

Description

PR/SET domain 16 [Source:RGD Symbol;Acc:2324431]

Gene Synonyms

LOC100366024, LOC103692529

Location

mRatBN7.2:CM026978.1

About this gene

This gene has 2 transcripts (splice variants), 122 orthologues, 1 paralogue and is associated with 18 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076044.2	Prdm16-201	4711	1276aa	ENSRNOP00000068441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000077015.3	Prdm16-202	7900	1178aa	ENSRNOP00000068014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJ70	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary