Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc41a3 ENSRNOG00000045821

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Description

solute carrier family 41, member 3 [Source:RGD Symbol;Acc:1589573]

Location

Primary_assembly 4: 124,666,808-124,711,967 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 4 transcripts (splice variants), 267 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120080.2	Slc41a3-203	2540	535aa	ENSRNOP00000087291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000073268.3	Slc41a3-201	2993	462aa	ENSRNOP00000065688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SWT5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000146243.1	Slc41a3-204	2921	438aa	ENSRNOP00000108387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000080734.3	Slc41a3-202	2267	488aa	ENSRNOP00000071826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1G1 A6IB88	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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