Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Aplf ENSRNOG00000043059

.

Description

aprataxin and PNKP like factor [Source:RGD Symbol;Acc:1565557]

Gene Synonyms

LOC500247, RGD1565557

Location

Primary_assembly 4: 121,627,800-121,679,961 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 2 transcripts (splice variants) and 179 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000041234.7	Aplf-201	2581	510aa	ENSRNOP00000043929.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q5G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000117709.2	Aplf-202	2538	486aa	ENSRNOP00000095757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AU35	-

.

Summary

.

.