Gene: Cfc1 ENSRNOG00000042646

Description

cripto, FRL-1, cryptic family 1 [Source:RGD Symbol;Acc:1562188]

Gene Synonyms

LOC501121, RGD1562188

Location

mRatBN7.2:CM026982.1

About this gene

This gene has 2 transcripts (splice variants), 102 orthologues, 3 paralogues and is associated with 6 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104316.1	Cfc1-202	1463	201aa	ENSRNOP00000084880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GC89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000066284.4	Cfc1-201	1009	170aa	ENSRNOP00000062738.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LV65	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary