Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hdgf ENSRNOG00000042261

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Description

heparin binding growth factor [Source:RGD Symbol;Acc:70961]

Location

Primary_assembly 2: 173,370,465-173,379,747 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103162.1	Hdgf-203	1661	237aa	ENSRNOP00000088839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VHK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000017234.6	Hdgf-201	1788	236aa	ENSRNOP00000017234.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPC7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000065211.4	Hdgf-202	1468	140aa	ENSRNOP00000060536.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R3J6	-

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Summary

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