Gene: Lsm5 ENSRNOG00000042126

Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:RGD Symbol;Acc:1308655]

Gene Synonyms

LOC306222

Location

mRatBN7.2:CM026977.1

About this gene

This gene has 4 transcripts (splice variants), 88 orthologues, 2 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065625.2	Lsm5-202	542	92aa	ENSRNOP00000062832.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZBJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000118324.1	Lsm5-205	633	84aa	ENSRNOP00000083668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVR9	-
ENSRNOT00000114266.1	Lsm5-204	461	82aa	ENSRNOP00000081351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRU9	-
ENSRNOT00000101731.1	Lsm5-203	392	59aa	ENSRNOP00000078939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G476	-

Summary