Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Gene: Iqcf1 ENSRNOG00000037289

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Description

IQ motif containing F1 [Source:RGD Symbol;Acc:1565640]

Gene Synonyms

LOC503227, RGD1565640

Location

Primary_assembly 8: 116,009,452-116,011,949 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 90 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000056391.5	Iqcf1-201	604	182aa	ENSRNOP00000053229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I2T9 D3ZLI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110544.2	Iqcf1-202	499	147aa	ENSRNOP00000085269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZQ9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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