Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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Molecular interactions
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ID History
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Gene: Spag17 ENSRNOG00000037196

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Description

sperm associated antigen 17 [Source:RGD Symbol;Acc:1592218]

Gene Synonyms

LOC690746

Location

Primary_assembly 2: 189,952,729-190,189,755 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 175 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000042263.8	Spag17-201	6855	2254aa	ENSRNOP00000044489.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZXP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000071938.4	Spag17-202	6563	2117aa	ENSRNOP00000065735.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R8D9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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