Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Gene: Faap20 ENSRNOG00000036876

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Description

FA core complex associated protein 20 [Source:RGD Symbol;Acc:1308923]

Gene Synonyms

RGD1308923

Location

Primary_assembly 5: 171,087,847-171,097,599 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants) and 72 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108872.2	Faap20-203	1451	245aa	ENSRNOP00000088935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000102719.2	Faap20-202	1361	215aa	ENSRNOP00000078144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y753	-
ENSRNOT00000055361.5	Faap20-201	1260	244aa	ENSRNOP00000052229.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AAA5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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