Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC120101770 ENSRNOG00000036813

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Description

protein NDRG3-like [Source:RGD Symbol;Acc:41037735]

Location

Primary_assembly 3: 165,890,091-166,049,887 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 7 transcripts (splice variants), 287 orthologues, 5 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055232.5	LOC120101770-201	1211	388aa	ENSRNOP00000052106.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000101329.2	LOC120101770-203	2608	348aa	ENSRNOP00000092611.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASR6	-
ENSRNOT00000109829.2	LOC120101770-205	2535	375aa	ENSRNOP00000086721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYR2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000097704.2	LOC120101770-202	2534	375aa	ENSRNOP00000097484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASR6	-
ENSRNOT00000118753.2	LOC120101770-207	2433	341aa	ENSRNOP00000083574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAX3	-
ENSRNOT00000115244.2	LOC120101770-206	1572	354aa	ENSRNOP00000093170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJ76	-
ENSRNOT00000103585.2	LOC120101770-204	1148	367aa	ENSRNOP00000087669.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYR2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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