Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Spn ENSRNOG00000036711

Description

sialophorin [Source:RGD Symbol;Acc:3750]

Gene Synonyms

Cd43, Lsn, Lsn1, gpL115

Location

Primary_assembly 1: 191,178,096-191,187,852 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 78 orthologues, 2 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000150721.1	Spn-203	1935	434aa	ENSRNOP00000100729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000055013.6	Spn-201	3151	392aa	ENSRNOP00000051894.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7 R9PXZ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100623.2	Spn-202	2909	392aa	ENSRNOP00000081397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7 R9PXZ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000157992.1	Spn-204	2764	392aa	ENSRNOP00000103347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7	-

Gene: Spn ENSRNOG00000036711

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Gene: Spn ENSRNOG00000036711

Summary

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