Summary
- Splice variants
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Sequence
- Secondary Structure
Comparative Genomics
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Gene: Faap100 ENSRNOG00000036699

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Description

FA core complex associated protein 100 [Source:RGD Symbol;Acc:1306926]

Gene Synonyms

LOC303742, RGD1306926

Location

Primary_assembly 10: 106,142,040-106,151,607 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 2 transcripts (splice variants) and 189 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103912.2	Faap100-202	2945	913aa	ENSRNOP00000079865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000054974.6	Faap100-201	3094	846aa	ENSRNOP00000051857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZX03	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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