Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cd5l ENSRNOG00000034230

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Description

Cd5 molecule-like [Source:RGD Symbol;Acc:1308526]

Gene Synonyms

LOC310693, MGC112716

Location

Primary_assembly 2: 175,107,352-175,127,659 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 39 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000052347.7	Cd5l-201	1098	365aa	ENSRNOP00000040520.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M8T7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000093342.3	Cd5l-202	1546	342aa	ENSRNOP00000076297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W2Q6J8 A6J605	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000110129.2	Cd5l-203	1508	316aa	ENSRNOP00000097146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS51	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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