Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Casp4 ENSRNOG00000033697

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Description

caspase 4 [Source:RGD Symbol;Acc:621757]

Gene Synonyms

Casp11, MGC124949

Location

Primary_assembly 8: 10,883,769-10,920,727 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 243 orthologues, 11 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000165692.1	Casp4-204	2351	406aa	ENSRNOP00000105500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000127348.1	Casp4-202	2333	400aa	ENSRNOP00000104886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000061973.6	Casp4-201	1684	398aa	ENSRNOP00000058685.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PSM0	-
ENSRNOT00000148101.1	Casp4-203	1091	340aa	ENSRNOP00000108989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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