Gene: Srek1 ENSRNOG00000032735

Description

splicing regulatory glutamic acid and lysine rich protein 1 [Source:RGD Symbol;Acc:621696]

Gene Synonyms

Sfrs12, Srrp86, Srsf12

Location

Primary_assembly 2: 36,583,412-36,619,001 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 23 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102302.2	Srek1-203	5996	607aa	ENSRNOP00000085824.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4G5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000040533.5	Srek1-201	5842	558aa	ENSRNOP00000049050.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V9I9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098044.2	Srek1-202	5762	570aa	ENSRNOP00000093834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGJ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Gene: Srek1 ENSRNOG00000032735

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Gene: Srek1 ENSRNOG00000032735

Summary

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