Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Capn13 ENSRNOG00000032375

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Description

calpain 13 [Source:RGD Symbol;Acc:1562682]

Gene Synonyms

CANP 13, MGC109045

Location

Primary_assembly 6: 27,823,517-27,918,665 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 4 transcripts (splice variants), 131 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047853.6	Capn13-201	2786	668aa	ENSRNOP00000039021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BK10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000160370.1	Capn13-204	2641	641aa	ENSRNOP00000105700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128507.1	Capn13-203	2499	605aa	ENSRNOP00000108062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111503.2	Capn13-202	2395	616aa	ENSRNOP00000077390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y693	-

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Summary

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