Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Col6a4 ENSRNOG00000031782

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Description

collagen, type VI, alpha 4 [Source:RGD Symbol;Acc:1564060]

Gene Synonyms

Col6a4p1, Dvwa, LOC315981, RGD1564060

Location

Primary_assembly 8: 106,617,050-106,733,263 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 2 transcripts (splice variants), 73 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047563.5	Col6a4-201	7611	2298aa	ENSRNOP00000042470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M6H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000111160.1	Col6a4-202	7110	2131aa	ENSRNOP00000086989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6Y7	-

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Summary

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