Gene: Rtl4 ENSRNOG00000031638

Description

retrotransposon Gag like 4 [Source:RGD Symbol;Acc:1588188]

Gene Synonyms

LOC680778, Zcchc16

Location

Primary_assembly X: 113,025,880-113,438,686 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 10 transcripts (splice variants), 45 orthologues, 6 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000123397.1	Rtl4-203	11013	301aa	ENSRNOP00000107459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000144598.1	Rtl4-207	8605	301aa	ENSRNOP00000100579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000159588.1	Rtl4-209	5806	301aa	ENSRNOP00000108207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000137479.1	Rtl4-206	5328	301aa	ENSRNOP00000102618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000050854.5	Rtl4-201	5295	301aa	ENSRNOP00000061685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5N6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116205.2	Rtl4-202	5178	301aa	ENSRNOP00000089653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5N6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000153191.1	Rtl4-208	5122	301aa	ENSRNOP00000106063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000124871.1	Rtl4-204	5025	301aa	ENSRNOP00000106381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000170785.1	Rtl4-210	4951	301aa	ENSRNOP00000104409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000126880.1	Rtl4-205	4921	301aa	ENSRNOP00000102970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Gene: Rtl4 ENSRNOG00000031638

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Gene: Rtl4 ENSRNOG00000031638

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