Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Eif1a ENSRNOG00000031421

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Description

eukaryotic translation initiation factor 1A [Source:RGD Symbol;Acc:1306331]

Gene Synonyms

Ab1-287, LOC317163, eIF-1A, eIF-4C

Location

Primary_assembly 18: 41,503,180-41,549,696 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 6 transcripts (splice variants), 230 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000121417.1	Eif1a-205	13186	144aa	ENSRNOP00000099297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099676.2	Eif1a-204	6153	144aa	ENSRNOP00000092892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW1 Q6VV72	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099432.2	Eif1a-203	4271	144aa	ENSRNOP00000094920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW1 Q6VV72	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000041237.7	Eif1a-201	2804	144aa	ENSRNOP00000046345.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW1 Q6VV72	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000160045.1	Eif1a-206	2225	144aa	ENSRNOP00000102515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW1	-
ENSRNOT00000087984.3	Eif1a-202	1024	144aa	ENSRNOP00000069410.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVA7 A6IWW1	-

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Summary

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