Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Abi1 ENSRNOG00000031325

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Description

abl-interactor 1 [Source:RGD Symbol;Acc:621008]

Gene Synonyms

E3b1, abi-1

Location

Primary_assembly 17: 90,006,925-90,087,827 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 5 transcripts (splice variants), 293 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000057572.6	Abi1-201	3001	481aa	ENSRNOP00000054381.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VD09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000108948.2	Abi1-205	2914	452aa	ENSRNOP00000093871.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGM2	-
ENSRNOT00000103736.2	Abi1-204	2824	422aa	ENSRNOP00000085236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0X0	-
ENSRNOT00000093928.2	Abi1-203	2737	393aa	ENSRNOP00000081022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQS1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000091023.3	Abi1-202	1783	476aa	ENSRNOP00000071079.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UQ93 A6KRZ5 Q9QZM5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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