Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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ID History
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Gene: Srxn1 ENSRNOG00000031167

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Description

sulfiredoxin 1 [Source:RGD Symbol;Acc:1307332]

Gene Synonyms

Ab2-390, LOC296271, Npn3

Location

Primary_assembly 3: 161,059,931-161,088,765 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 174 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000041456.6	Srxn1-201	774	243aa	ENSRNOP00000041813.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TP44	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000115549.2	Srxn1-202	729	228aa	ENSRNOP00000079019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLX4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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