Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slco6d1 ENSRNOG00000031146

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Description

solute carrier organic anion transporter family, member 6d1 [Source:RGD Symbol;Acc:1359388]

Gene Synonyms

LOC367321

Location

Primary_assembly 9: 105,073,768-105,187,221 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 3 transcripts (splice variants), 126 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084398.3	Slco6d1-203	2392	700aa	ENSRNOP00000070061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000065171.4	Slco6d1-202	2103	697aa	ENSRNOP00000060190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9K3Y706 Q5XI61	-
ENSRNOT00000043386.6	Slco6d1-201	2082	652aa	ENSRNOP00000043903.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZC14	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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