Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nfasc ENSRNOG00000030515

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Description

neurofascin [Source:RGD Symbol;Acc:620911]

Gene Synonyms

NF

Location

Primary_assembly 13: 46,549,369-46,736,139 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 8 transcripts (splice variants), 286 orthologues, 35 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000159596.1	Nfasc-208	10065	1362aa	ENSRNOP00000106961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000060871.6	Nfasc-203	10014	1345aa	ENSRNOP00000057594.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QSS8	-
ENSRNOT00000051512.7	Nfasc-202	10002	1341aa	ENSRNOP00000049964.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZNW5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110535.2	Nfasc-205	9768	1157aa	ENSRNOP00000091013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIP5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000044972.8	Nfasc-201	9753	1152aa	ENSRNOP00000044067.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZW56	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103161.2	Nfasc-204	9744	1255aa	ENSRNOP00000095471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AN44	-
ENSRNOT00000136601.1	Nfasc-207	3991	1255aa	ENSRNOP00000101086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000110633.2	Nfasc-206	2769	892aa	ENSRNOP00000089830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIE9	-

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Summary

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