Summary
- Splice variants
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Gene: Gypc ENSRNOG00000029939

Description

glycophorin C [Source:RGD Symbol;Acc:1310295]

Gene Synonyms

GPC, LOC364837, MGC124900

Location

Primary_assembly 18: 24,160,739-24,193,204 reverse strand.

mRatBN7.2:CM026991.1

About this gene

This gene has 3 transcripts (splice variants), 135 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111877.1	Gypc-203	1894	100aa	ENSRNOP00000086068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A530	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000106612.1	Gypc-202	2193	92aa	ENSRNOP00000079154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMD3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000046369.4	Gypc-201	1887	95aa	ENSRNOP00000049537.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6XFR6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Gene: Gypc ENSRNOG00000029939

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Gene: Gypc ENSRNOG00000029939

Summary

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