Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cxadrl1 ENSRNOG00000029029

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Description

coxsackie virus and adenovirus receptor-like 1 [Source:RGD Symbol;Acc:735201]

Gene Synonyms

LOC100359797, LOC102549447, LOC103690070, LOC361873

Location

Primary_assembly 8: 99,565,421-99,590,972 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096251.1	Cxadrl1-203	1633	393aa	ENSRNOP00000090361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000041894.5	Cxadrl1-201	1535	390aa	ENSRNOP00000050795.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V9K3	-
ENSRNOT00000051939.5	Cxadrl1-202	1407	390aa	ENSRNOP00000047625.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V9H2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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