Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Socs5 ENSRNOG00000028504

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Description

suppressor of cytokine signaling 5 [Source:RGD Symbol;Acc:1564914]

Gene Synonyms

LOC500616, RGD1564914

Location

Primary_assembly 6: 13,234,062-13,273,883 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 4 transcripts (splice variants), 195 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000134939.1	Socs5-204	12965	536aa	ENSRNOP00000110665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6H9E6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000108488.2	Socs5-203	8326	536aa	ENSRNOP00000087303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6H9E6 D3ZUE4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000094405.2	Socs5-202	5522	536aa	ENSRNOP00000084063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6H9E6 D3ZUE4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000020337.6	Socs5-201	4962	536aa	ENSRNOP00000020346.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6H9E6 D3ZUE4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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