Gene: Mmp11 ENSRNOG00000028344

Description

matrix metallopeptidase 11 [Source:RGD Symbol;Acc:3099]

Gene Synonyms

LOC103694874, MMP-11, SL-3, ST3

Location

GRCr8:CM070410.1

About this gene

This gene has 2 transcripts (splice variants), 253 orthologues, 23 paralogues and is associated with 7 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000031400.7	Mmp11-201	2517	508aa	ENSRNOP00000035334.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q499S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000087725.3	Mmp11-202	2435	488aa	ENSRNOP00000074176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R8J4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary