Gene: C10h17orf78 ENSRNOG00000028116

Description

similar to human chromosome 17 open reading frame 78 [Source:RGD Symbol;Acc:7517962]

Gene Synonyms

LOC100361746, LOC102552988

Location

GRCr8:CM070400.1

About this gene

This gene has 2 transcripts (splice variants), 78 orthologues and is associated with 6 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000038955.8	C10h17orf78-201	891	296aa	ENSRNOP00000030542.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A521	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000104625.2	C10h17orf78-202	1440	283aa	ENSRNOP00000090304.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMT5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary