Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Fhad1 ENSRNOG00000028064

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Description

forkhead associated phosphopeptide binding domain 1 [Source:RGD Symbol;Acc:1563444]

Gene Synonyms

LOC500577, MGC116177, RGD1563444

Location

Primary_assembly 5: 159,474,158-159,593,367 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 139 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018953.9	Fhad1-201	4576	1423aa	ENSRNOP00000018953.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140UHW9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000095076.2	Fhad1-202	5308	1405aa	ENSRNOP00000080164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQ37	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000139718.1	Fhad1-204	4188	1346aa	ENSRNOP00000101934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103267.2	Fhad1-203	1577	395aa	ENSRNOP00000091815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFX9	-

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Summary

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