Summary
- Splice variants
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Gene: Ift56 ENSRNOG00000027617

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Description

intraflagellar transport 56 [Source:RGD Symbol;Acc:1561363]

Gene Synonyms

LOC500086, Ttc26

Location

Primary_assembly 4: 68,057,580-68,119,338 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 229 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000031193.7	Ift56-201	5414	554aa	ENSRNOP00000034588.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U2N8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000169177.1	Ift56-205	5307	552aa	ENSRNOP00000110887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000108503.2	Ift56-203	3765	503aa	ENSRNOP00000080167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZP09	-
ENSRNOT00000078066.3	Ift56-202	1890	523aa	ENSRNOP00000071147.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R4G6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000163888.1	Ift56-204	1842	525aa	ENSRNOP00000109519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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