Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tsga10ip ENSRNOG00000027564

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Description

testis specific 10 interacting protein [Source:RGD Symbol;Acc:1302964]

Location

Primary_assembly 1: 212,129,923-212,144,209 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 92 orthologues, 2 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000038198.6	Tsga10ip-201	1913	562aa	ENSRNOP00000033901.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103572.2	Tsga10ip-203	1901	558aa	ENSRNOP00000095144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMG0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000083656.3	Tsga10ip-202	1564	512aa	ENSRNOP00000068676.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTE2	-

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Summary

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