Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmem116 ENSRNOG00000027480

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Description

transmembrane protein 116 [Source:RGD Symbol;Acc:1596066]

Gene Synonyms

LOC690442, LOC690455

Location

Primary_assembly 12: 40,702,258-40,750,140 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 4 transcripts (splice variants), 179 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000154771.1	Tmem116-204	1559	362aa	ENSRNOP00000109767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000104465.2	Tmem116-202	1494	337aa	ENSRNOP00000081376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRI1	-
ENSRNOT00000067503.4	Tmem116-201	1458	358aa	ENSRNOP00000063208.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J1E6 F1LRF5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000114714.2	Tmem116-203	1353	323aa	ENSRNOP00000092876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEQ5 A6J1E5	-

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Summary

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