Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ttc39d ENSRNOG00000027343

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Description

tetratricopeptide repeat domain 39D [Source:RGD Symbol;Acc:1311615]

Gene Synonyms

LOC366531, RGD1311615

Location

Primary_assembly 6: 14,786,089-14,811,978 reverse strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 2 transcripts (splice variants), 234 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117617.1	Ttc39d-202	4597	604aa	ENSRNOP00000087266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7N7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000023114.7	Ttc39d-201	4251	604aa	ENSRNOP00000023114.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7N7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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