Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cntnap3 ENSRNOG00000027309

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Description

contactin associated protein family member 3 [Source:RGD Symbol;Acc:1563615]

Gene Synonyms

AABR07026805.1, Cntnap3b, LOC290952, LRRGT00090, RGD1563615

Location

Primary_assembly 17: 273,137-461,233 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 4 transcripts (splice variants), 293 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000046525.7	Cntnap3-201	6381	1289aa	ENSRNOP00000040519.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AA49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000126583.1	Cntnap3-202	6261	1249aa	ENSRNOP00000098783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000143338.1	Cntnap3-203	6060	1182aa	ENSRNOP00000100515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000170386.1	Cntnap3-204	650	212aa	ENSRNOP00000111528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TUF4	-

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Summary

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