Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gga3 ENSRNOG00000027057

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Description

golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:RGD Symbol;Acc:1309553]

Gene Synonyms

LOC360658

Location

Primary_assembly 10: 101,324,378-101,342,373 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 278 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114183.2	Gga3-204	3731	727aa	ENSRNOP00000090243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000135029.1	Gga3-205	3719	662aa	ENSRNOP00000103708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000089894.3	Gga3-202	3712	726aa	ENSRNOP00000069301.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R2B7	-
ENSRNOT00000064776.4	Gga3-201	3524	658aa	ENSRNOP00000060463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HKP0 D3ZHG8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098611.2	Gga3-203	3485	645aa	ENSRNOP00000094193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APK2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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