Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Matcap2 ENSRNOG00000026979

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Description

microtubule associated tyrosine carboxypeptidase 2 [Source:RGD Symbol;Acc:1561444]

Gene Synonyms

AABR07069466.1, LOC315473, RGD1561444

Location

Primary_assembly 8: 29,196,927-29,247,058 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 5 transcripts (splice variants), 195 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112125.2	Matcap2-204	2765	623aa	ENSRNOP00000088769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000031893.6	Matcap2-201	3091	552aa	ENSRNOP00000033075.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ABI4	-
ENSRNOT00000111441.2	Matcap2-203	2672	592aa	ENSRNOP00000097639.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM56	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000105037.2	Matcap2-202	2449	596aa	ENSRNOP00000094279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKN7	-
ENSRNOT00000132171.1	Matcap2-205	2381	533aa	ENSRNOP00000112781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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