Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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Genetic Variation
- Variant table
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- Structural variants
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Gene: Jaml ENSRNOG00000026702

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Description

junction adhesion molecule like [Source:RGD Symbol;Acc:1562572]

Gene Synonyms

Amica1, LOC315610, RGD1562572

Location

Primary_assembly 8: 54,281,644-54,313,500 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants) and 68 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007588.7	Jaml-201	2549	379aa	ENSRNOP00000007588.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A1C2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000140047.1	Jaml-203	2496	373aa	ENSRNOP00000109979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000118267.2	Jaml-202	2346	378aa	ENSRNOP00000078240.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKH4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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