Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Syt7 ENSRNOG00000026432

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Description

synaptotagmin 7 [Source:RGD Symbol;Acc:62013]

Gene Synonyms

SytVII

Location

Primary_assembly 1: 216,456,259-216,518,718 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 10 transcripts (splice variants), 271 orthologues, 31 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000036232.8	Syt7-205	7286	687aa	ENSRNOP00000031195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000007429.10	Syt7-201	7163	646aa	ENSRNOP00000007429.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-8	-
ENSRNOT00000035576.8	Syt7-202	7154	643aa	ENSRNOP00000031890.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-4	-
ENSRNOT00000036180.8	Syt7-204	7058	611aa	ENSRNOP00000032388.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QJI4	-
ENSRNOT00000036168.8	Syt7-203	6926	567aa	ENSRNOP00000031944.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000036283.8	Syt7-206	6917	564aa	ENSRNOP00000031816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-7	-
ENSRNOT00000172421.1	Syt7-210	6855	645aa	ENSRNOP00000102358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000047964.6	Syt7-207	6794	523aa	ENSRNOP00000049360.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-5	-
ENSRNOT00000099494.2	Syt7-209	6566	447aa	ENSRNOP00000085392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1J0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000048704.7	Syt7-208	6434	403aa	ENSRNOP00000040667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62747-1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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