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- Splice variants
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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Gene: Tmem245 ENSRNOG00000026271

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Description

transmembrane protein 245 [Source:RGD Symbol;Acc:1308958]

Gene Synonyms

LOC298020, RGD1308958

Location

Primary_assembly 5: 76,366,157-76,442,888 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants) and 217 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064043.6	Tmem245-202	12389	888aa	ENSRNOP00000063739.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZR79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116562.2	Tmem245-204	12365	880aa	ENSRNOP00000093041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGG4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000032299.7	Tmem245-201	12353	876aa	ENSRNOP00000035996.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZXD8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000103281.2	Tmem245-203	12224	833aa	ENSRNOP00000079058.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM20	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000151825.1	Tmem245-205	12170	815aa	ENSRNOP00000103723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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