Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pnpla4 ENSRNOG00000026157

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Description

patatin like phospholipase domain containing 4 [Source:RGD Symbol;Acc:1562200]

Gene Synonyms

LOC363471, RGD1562200

Location

Primary_assembly X: 46,193,332-46,205,089 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 4 transcripts (splice variants), 123 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030771.8	Pnpla4-201	1014	302aa	ENSRNOP00000033754.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A227	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000097042.2	Pnpla4-202	2155	292aa	ENSRNOP00000089216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ABA3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000146796.1	Pnpla4-204	1496	295aa	ENSRNOP00000109285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000143064.1	Pnpla4-203	986	230aa	ENSRNOP00000100393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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