Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Rbm46 ENSRNOG00000025823

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Description

RNA binding motif protein 46 [Source:RGD Symbol;Acc:1560205]

Gene Synonyms

LOC310548, RGD1560205

Location

Primary_assembly 2: 170,496,142-170,540,068 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116504.2	Rbm46-203	2735	533aa	ENSRNOP00000089919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000098771.2	Rbm46-202	2600	470aa	ENSRNOP00000094048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALR2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000035846.5	Rbm46-201	1808	532aa	ENSRNOP00000031755.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZAE2	-

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Summary

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