Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cphx1 ENSRNOG00000025433

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Description

cytoplasmic polyadenylated homeobox 1 [Source:RGD Symbol;Acc:1565219]

Gene Synonyms

Cphx, LOC502042, RGD1565219

Location

Primary_assembly 16: 1,528,440-1,537,082 forward strand.

mRatBN7.2:CM026989.1

About this gene

This gene has 1 transcript (splice variant), 46 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000035065.4	Cphx1-201	670	193aa	ENSRNOP00000033244.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M859	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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