Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Focad ENSRNOG00000024402

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Description

focadhesin [Source:RGD Symbol;Acc:1311849]

Gene Synonyms

Ir22, LOC313346, RGD1311849

Location

Primary_assembly 5: 107,610,416-107,933,109 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 6 transcripts (splice variants), 201 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000058387.6	Focad-201	5801	1798aa	ENSRNOP00000055189.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LU27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000124761.1	Focad-203	6356	1754aa	ENSRNOP00000103609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000150687.1	Focad-204	5793	1773aa	ENSRNOP00000100626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173561.1	Focad-206	5595	1719aa	ENSRNOP00000104359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000155547.1	Focad-205	5555	1687aa	ENSRNOP00000109940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000106842.2	Focad-202	5543	1712aa	ENSRNOP00000096319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQM8	-

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Summary

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